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Molecular epidemiology of koi herpesvirus

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Date
2009
Author
Kurita, Jun
Yuasa, Kei
Ito, Takafumi
Sano, Motohiko
Hedrick, Ronald P.
Engelsma, Marc Y.
Haenen, Olga L. M.
Sunarto, Agus
Kholidin, Edy Barkat
Chou, Hsin-Yiu
Tung, Ming-Chen
de la Peña, Leobert
Lio-Po, Gilda
Tu, Chien
Way, Keith
Iida, Takaji
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Abstract
Three regions of koi herpesvirus (KHV) genomic DNA were compared for 34 samples from Japan, six from Indonesia, two from Taiwan, one from the Philippines, 13 from the Netherlands, one from the UK, one from the USA and one from Israel. The analyzed genomic regions included known PCR-detection targets (SphI-5, 9/5 and the thymidine kinase gene). The KHVs from Asian countries were very homogeneous, although two variants were noted based on a single nucleotide polymorphism. In contrast, seven variants were found in KHVs from outside of Asia, and although closely related to one another, they were clearly distinct from those from Asian. The results suggest that a clear genetic distinction exists between Asian and European (including each single isolate from the USA and Israel) types of KHV, and that unique types of KHV were independently introduced or emerged in the respective geographic locations.
URI
http://hdl.handle.net/10862/2094
Suggested Citation
Kurita, J., Yuasa, K., Ito, T., Sano, M., Hedrick, R. P., Engelsma, M. Y., ... & Iida, T. (2009). Molecular epidemiology of koi herpesvirus. Fish Pathology, 44(2), 59-66.
DOI
10.3147/jsfp.44.59
Subject
genomes ASFA; pathology ASFA; epidemiology ASFA; nucleotide sequence ASFA; viruses ASFA; DNA ASFA; polymerase chain reaction ASFA; Biopolymorphism; nucleotides ASFA; Cyprinus carpio; British Isles; Philippines; USA; Taiwan; Indonesia; Israel; Netherlands; Japan
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  • AQD Journal Articles [1178]

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